BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E01LP1|AL426215
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1531 0.0
>3x_Contig1530
Length = 6216
Score = 1531 bits (769), Expect = 0.0
Identities = 787/795 (98%), Gaps = 1/795 (0%)
Strand = Plus / Plus
Query: 1 gatccgggttgaagacattgtcaggtagggagtttggctggggcggcacatctgttaaac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4614 gatccgggttgaagacattgtcaggtggggagtttggctggggcggcacatctgttaaac 4673
Query: 61 gataacgcagatgtcctaagggggactcatggagaacagaaatctccagtagaacaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4674 gataacgcagatgtcctaagggggactcatggagaacagaaatctccagtagaacaaaag 4733
Query: 121 ggtaaaagtccccttgattttgattttcagtgtgaatacaaaccatgaaagtgtggccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 ggtaaaagtccccttgattttgattttcagtgtgaatacaaaccatgaaagtgtggccta 4793
Query: 181 tcgatcctttaggtcctcggaatttgaggctagaggtgccagaaaagttaccacagggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 tcgatcctttaggtcctcggaatttgaggctagaggtgccagaaaagttaccacagggat 4853
Query: 241 aactggcttgtggcagtcaagcgttcatagcgacattgctttttgattcttcgatgtcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4854 aactggcttgtggcagtcaagcgttcatagcgacattgctttttgattcttcgatgtcgg 4913
Query: 301 ctcttcctatcataccgaagcagaattcggtaagcsttggattgttcacccactaatagg 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4914 ctcttcctatcataccgaagcagaattcggtaagcgttggattgttcacccactaatagg 4973
Query: 361 gaacgtgagccgggtttagaccgtcgtgagacaggttagttttaccctactgatgaatgt 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4974 gaacgtgagctgggtttagaccgtcgtgagacaggttagttttaccctactgatgaatgt 5033
Query: 421 yatcgcaatagtaattgaacttagtacgagaggaacagttcattcggataattggttttt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5034 tatcgcaatagtaattgaacttagtacgagaggaacagttcattcggataattggttttt 5093
Query: 481 gcggctgtctgatcaggcattgccgcgaa-ctaccatccgctggattatggctgaacgcc 539
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5094 gcggctgtctgatcaggcattgccgcgaagctaccatccgctggattatggctgaacgcc 5153
Query: 540 tctmagtcagaatccatgcyagaacgcsatgatttctttgccttgcacaatatagaagga 599
||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5154 tctaagtcagaatccatgctagaacgcgatgatttctttgccttgcacaatatagaagga 5213
Query: 600 taagaataaggcgtctttttggcgtcgctgaaccatagcaggctggcaacggtgctctta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5214 taagaataaggcgtctttttggcgtcgctgaaccatagcaggctggcaacggtgctctta 5273
Query: 660 gcggaaaggctttgggtgcttgccggcgaattgcaatgtcattttgcgcaaggataaatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5274 gcggaaaggctttgggtgcttgccggcgaattgcaatgtcattttgcgcaaggataaatc 5333
Query: 720 atttgtatacgacttaaatgtacaacagggtattgtaagcagtagagtagccttgttgtt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5334 atttgtatacgacttaaatgtacaacagggtattgtaagcagtagagtagccttgttgtt 5393
Query: 780 acgatctgctgagat 794
|||||||||||||||
Sbjct: 5394 acgatctgctgagat 5408
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3734
Number of Sequences: 1807
Number of extensions: 3734
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)